Information for 10-CTACTACW (Motif 21)


Reverse Opposite:

p-value:1e-8
log p-value:-1.976e+01
Information Content per bp:1.764
Number of Target Sequences with motif2241.0
Percentage of Target Sequences with motif16.92%
Number of Background Sequences with motif5535.0
Percentage of Background Sequences with motif15.08%
Average Position of motif in Targets226.8 +/- 131.0bp
Average Position of motif in Background223.0 +/- 125.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTACTACW------
ATTTACGACAAATAGC

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CTACTACW---
ACATGCTACCTAATAC

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTACTACW-
-TACTNNNN

PB0136.1_IRC900814_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTACTACW------
TTTTACGACTTTCCAT

PB0096.1_Zfp187_1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTACTACW--
TTATGTACTAATAA

PH0066.1_Hoxc11/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CTACTACW---
NNNTTTTACGACNTTN

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CTACTACW---
NNNATTTTACGACNNTN

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTACTACW---
ACTTGCTACCTACACC

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTACTACW---
ANNTTTTACGACNTNN

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTACTACW---
NNGTTTTACGACTTTA