Information for 11-TGGACTCG (Motif 22)


Reverse Opposite:

p-value:1e-8
log p-value:-1.940e+01
Information Content per bp:1.977
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif94.2
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets216.0 +/- 126.9bp
Average Position of motif in Background229.7 +/- 127.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTCG----
NNATTGGACTTTNGNN

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGGACTCG------
TACGAGACTCCTCTAAC

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTCG----
NNTTTGCACACGGCCC

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGGACTCG
NNTGTGGATTSS

MA0130.1_ZNF354C/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGACTCG
GTGGAT---

MA0479.1_FOXH1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGACTCG-
TGTGGATTNNN

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTCG-----
NNNTTGGTTTCGNTNNN

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGACTCG
AGGCCTAG

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGGACTCG-----
NNAGGGACAAGGGCNC

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGGACTCG-
CTGACCTTTG