Information for 23-ATCCCGGKTTTA (Motif 25)


Reverse Opposite:

p-value:1e-4
log p-value:-1.071e+01
Information Content per bp:1.663
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets198.6 +/- 111.3bp
Average Position of motif in Background103.5 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATCCCGGKTTTA
ACCACTCTCGGTCAC-

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATCCCGGKTTTA
AGTATTCTCGGTTGC-

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATCCCGGKTTTA
ACTTCCGGNT---

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATCCCGGKTTTA
GTACATCCGGATTTTT

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ATCCCGGKTTTA
NYTTCCCGCC----

MA0473.1_ELF1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ATCCCGGKTTTA
CACTTCCTGNTTC-

ETS(ETS)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATCCCGGKTTTA
ACTTCCGGTT---

MA0471.1_E2F6/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ATCCCGGKTTTA
NCTTCCCGCCC---

PB0020.1_Gabpa_1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----ATCCCGGKTTTA
NNNNACTTCCGGTATNN

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ATCCCGGKTTTA
ACATCCTGNT----