| p-value: | 1e-1 |
| log p-value: | -3.302e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 0.02% |
| Number of Background Sequences with motif | 2.1 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 227.3 +/- 130.9bp |
| Average Position of motif in Background | 335.6 +/- 102.5bp |
| Strand Bias (log2 ratio + to - strand density) | 4.6 |
| Multiplicity (# of sites on avg that occur together) | 8.67 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0006.1_Arnt::Ahr/Jaspar
| Match Rank: | 1 |
| Score: | 0.65
| | Offset: | 6
| | Orientation: | reverse strand |
| Alignment: | GTCTTACACGCG
------CACGCA |
|
|
|
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 2 |
| Score: | 0.65
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GTCTTACACGCG
TGTCTGDCACCT- |
|
|
|
MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
| Match Rank: | 3 |
| Score: | 0.62
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GTCTTACACGCG
CTGTCTGTCACCT- |
|
|
|
PB0147.1_Max_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.58
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | GTCTTACACGCG----
--GTGCCACGCGACTG |
|
|
|
PB0111.1_Bhlhb2_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.57
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GTCTTACACGCG--------
ACCGCCNTCCACGTGTANNGACA |
|
|
|
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer
| Match Rank: | 6 |
| Score: | 0.56
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | GTCTTACACGCG-
---TBGCACGCAA |
|
|
|
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 7 |
| Score: | 0.56
| | Offset: | 6
| | Orientation: | reverse strand |
| Alignment: | GTCTTACACGCG--
------CACGTGGN |
|
|
|
MA0004.1_Arnt/Jaspar
| Match Rank: | 8 |
| Score: | 0.55
| | Offset: | 6
| | Orientation: | reverse strand |
| Alignment: | GTCTTACACGCG
------CACGTG |
|
|
|
E2F(E2F)/Hela-CellCycle-Expression/Homer
| Match Rank: | 9 |
| Score: | 0.54
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | GTCTTACACGCG--
--TTTTCGCGCGAA |
|
|
|
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer
| Match Rank: | 10 |
| Score: | 0.54
| | Offset: | 6
| | Orientation: | reverse strand |
| Alignment: | GTCTTACACGCG--
------CACGTGNC |
|
|
|
