Information for 7-CACATGYACACA (Motif 4)


Reverse Opposite:

p-value:1e-22
log p-value:-5.153e+01
Information Content per bp:1.664
Number of Target Sequences with motif1341.0
Percentage of Target Sequences with motif10.13%
Number of Background Sequences with motif2842.6
Percentage of Background Sequences with motif7.74%
Average Position of motif in Targets225.3 +/- 122.7bp
Average Position of motif in Background220.9 +/- 141.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.61
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACATGYACACA-----
CAGATGTGCACATACGT

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACATGYACACA-----
TACATGTGCACATAAAA

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CACATGYACACA-----
-CGAAGCACACAAAATA

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CACATGYACACA-----
-AGCGGCACACACGCAA

MA0058.2_MAX/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CACATGYACACA
AAGCACATGG-----

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CACATGYACACA
ANTATTACATGTANNNN

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CACATGYACACA
NNTATTACATGTANNNT

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CACATGYACACA
ANTNTTACATGTATNTA

MA0157.1_FOXO3/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CACATGYACACA
----TGTAAACA

MA0147.2_Myc/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CACATGYACACA
AAGCACATGG-----