Information for 8-GCCTCCYGAGTW (Motif 5)


Reverse Opposite:

p-value:1e-21
log p-value:-5.058e+01
Information Content per bp:1.700
Number of Target Sequences with motif2920.0
Percentage of Target Sequences with motif22.05%
Number of Background Sequences with motif6857.9
Percentage of Background Sequences with motif18.68%
Average Position of motif in Targets223.2 +/- 121.4bp
Average Position of motif in Background221.2 +/- 123.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.46
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCCYGAGTW-
TNTCCTGCTGTGNNG

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCYGAGTW--
RGSMTBCTGGGAAAT

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCCYGAGTW-
TCNCCTGCTGNGNNN

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCTCCYGAGTW
CNGTCCTCCC-----

MA0154.2_EBF1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCTCCYGAGTW
GTCCCCAGGGA-

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCCYGAGTW
CCCCCTGCTGTG--

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCCTCCYGAGTW
TACGAGACTCCTCTAAC

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCCTCCYGAGTW
CNAGGCCT--------

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCCYGAGTW-
NNTCCTGCTGTGNNN

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GCCTCCYGAGTW
GGTCCCGCCCCCTTCTC-