Information for 8-AKTAGCYRGG (Motif 7)


Reverse Opposite:

p-value:1e-18
log p-value:-4.196e+01
Information Content per bp:1.500
Number of Target Sequences with motif2380.0
Percentage of Target Sequences with motif17.97%
Number of Background Sequences with motif5564.7
Percentage of Background Sequences with motif15.16%
Average Position of motif in Targets224.0 +/- 127.7bp
Average Position of motif in Background223.1 +/- 124.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0132.1_Pdx1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AKTAGCYRGG
AATTAG-----

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AKTAGCYRGG---
NNNGTAACTANGNNA

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AKTAGCYRGG
ATGTACAGTAGCAAAG

MA0032.1_FOXC1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AKTAGCYRGG
GGTAAGTA------

PH0032.1_Evx2/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------AKTAGCYRGG
ANCGCTAATTAGCGGTN

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AKTAGCYRGG
NNNTTAGGTAGCNTNT

MA0075.1_Prrx2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AKTAGCYRGG
AATTA------

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AKTAGCYRGG
NNTGTAGGTAGCANNT

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AKTAGCYRGG
ATTTACAGTAGCAAAA

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AKTAGCYRGG
RGGATTAR-----