Information for 16-AAGCATTCTCAG (Motif 10)


Reverse Opposite:

p-value:1e-9
log p-value:-2.301e+01
Information Content per bp:1.966
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets162.2 +/- 95.7bp
Average Position of motif in Background140.3 +/- 98.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAGCATTCTCAG----
-AGTATTCTCGGTTGC

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGCATTCTCAG----
-ACCACTCTCGGTCAC

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAGCATTCTCAG-
---HTTTCCCASG

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAGCATTCTCAG----
-NNAATTCTCGNTNAN

MA0164.1_Nr2e3/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAGCATTCTCAG
CAAGCTT------

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AAGCATTCTCAG----
----TTTCTNAGAAAN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AAGCATTCTCAG-
---AAATCACTGC

MA0483.1_Gfi1b/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AAGCATTCTCAG--
---AAATCACAGCA

MA0078.1_Sox17/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AAGCATTCTCAG
-CTCATTGTC--

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AAGCATTCTCAG
--RCATTCCWGG