Information for 7-CGTAGTGG (Motif 17)


Reverse Opposite:

p-value:1e-7
log p-value:-1.708e+01
Information Content per bp:1.597
Number of Target Sequences with motif880.0
Percentage of Target Sequences with motif27.80%
Number of Background Sequences with motif11049.9
Percentage of Background Sequences with motif23.65%
Average Position of motif in Targets154.8 +/- 90.0bp
Average Position of motif in Background158.5 +/- 90.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0122.1_Nkx3-2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGTAGTGG-
TTAAGTGGA

MA0130.1_ZNF354C/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CGTAGTGG--
----GTGGAT

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CGTAGTGG----
NNNANTGCAGTGCNNTT

MA0027.1_En1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGTAGTGG--
AAGTAGTGCCC

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGTAGTGG------
TGCGGAGTGGGACTGG

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGTAGTGG--
TTGAGTGSTT

PB0106.1_Arid5a_2/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CGTAGTGG---
TNNTTTCGTATTNNANN

MA0057.1_MZF1_5-13/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGTAGTGG---
-GGAGGGGGAA

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGTAGTGG
GGTAAGTA----

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGTAGTGG-
CTYRAGTGSY