Information for 19-CACMCACACA (Motif 18)


Reverse Opposite:

p-value:1e-7
log p-value:-1.662e+01
Information Content per bp:1.528
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif3.44%
Number of Background Sequences with motif928.7
Percentage of Background Sequences with motif1.99%
Average Position of motif in Targets166.8 +/- 86.4bp
Average Position of motif in Background155.8 +/- 85.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CACMCACACA
CRCCCACGCA

MA0472.1_EGR2/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----CACMCACACA-
CCCCCGCCCACGCAC

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CACMCACACA-
AGCGGCACACACGCAA

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CACMCACACA
YCCGCCCACGCN

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CACMCACACA
GGCCACACCCAN-

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACMCACACA
GCCACACCCA--

MA0493.1_Klf1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CACMCACACA
GGCCACACCCA--

MA0162.2_EGR1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CACMCACACA
CCCCCGCCCCCGCC

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CACMCACACA
AGCAACAGCCGCACC

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACMCACACA--
TCCGCCCCCGCATT