Information for 10-ATTCAATG (Motif 20)


Reverse Opposite:

p-value:1e-6
log p-value:-1.569e+01
Information Content per bp:1.850
Number of Target Sequences with motif287.0
Percentage of Target Sequences with motif9.07%
Number of Background Sequences with motif3116.2
Percentage of Background Sequences with motif6.67%
Average Position of motif in Targets156.7 +/- 89.1bp
Average Position of motif in Background157.0 +/- 91.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----ATTCAATG---
AATCAATTCAATAATT

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--ATTCAATG-----
TAATTCAATGAAGTG

MA0151.1_ARID3A/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATTCAATG
-TTTAAT-

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATTCAATG-
TAATCAATTA

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATTCAATG------
ACTATGAATGAATGAT

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATTCAATG-----
GAAGATCAATCACTAA

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTCAATG
GCATTCCAGN

PB0197.1_Zfp105_2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATTCAATG------
ATGGTTCAATAATTTTG

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTCAATG--
TAATYNRATTAR

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATTCAATG-
DGATCRATAN