Information for 21-AGGAGAACAGTC (Motif 21)


Reverse Opposite:

p-value:1e-6
log p-value:-1.490e+01
Information Content per bp:1.901
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets232.4 +/- 42.1bp
Average Position of motif in Background243.9 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGAGAACAGTC
GGGAGGACNG--

MA0100.2_Myb/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGGAGAACAGTC-
---CCAACTGCCA

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGAGAACAGTC--
NNNNTGAGCACTGTNNG

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGGAGAACAGTC-
---CCAACTGCCA

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGGAGAACAGTC-
---NHAACBGYYV

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGGAGAACAGTC
----YAACBGCC

PB0047.1_Myf6_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGAGAACAGTC----
CNGACACCTGTTCNNN

MA0115.1_NR1H2::RXRA/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGAGAACAGTC---
AAAGGTCAAAGGTCAAC

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGAGAACAGTC-----
-AAAGACCTGTCAATCC

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGAGAACAGTC----
CGACCAACTGCCATGC