Information for 14-CTAACCAG (Motif 22)


Reverse Opposite:

p-value:1e-6
log p-value:-1.477e+01
Information Content per bp:1.791
Number of Target Sequences with motif388.0
Percentage of Target Sequences with motif12.26%
Number of Background Sequences with motif4467.2
Percentage of Background Sequences with motif9.56%
Average Position of motif in Targets160.5 +/- 89.3bp
Average Position of motif in Background158.9 +/- 90.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTAACCAG-----
GANGTTAACTAGTTTNN

MA0103.2_ZEB1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTAACCAG
CCTCACCTG

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTAACCAG
NNACTTACCTN

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTAACCAG---
-ATGCCAGACN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTAACCAG--
NAAACCACAG

MA0145.2_Tcfcp2l1/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CTAACCAG
CCAGTTCAAACCAG

PB0159.1_Rfx4_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTAACCAG----
NNNGTAACTANGNNA

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTAACCAG---
-AAACCACANN

MA0060.2_NFYA/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTAACCAG------
TGGACCAATCAGCACTCT

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTAACCAG---
-AAACCACAGC