Information for 15-GACGGGGT (Motif 23)


Reverse Opposite:

p-value:1e-6
log p-value:-1.396e+01
Information Content per bp:1.818
Number of Target Sequences with motif444.0
Percentage of Target Sequences with motif14.02%
Number of Background Sequences with motif5251.1
Percentage of Background Sequences with motif11.24%
Average Position of motif in Targets150.8 +/- 89.5bp
Average Position of motif in Background155.7 +/- 94.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GACGGGGT---
NNAGGGGCGGGGTNNA

PB0107.1_Ascl2_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GACGGGGT---
NATNGGGNGGGGANAN

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GACGGGGT---
NAGANTGGCGGGGNGNA

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GACGGGGT
GGGGGGGG-

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GACGGGGT-
GGGGGCGGGGCC

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GACGGGGT--
AGGGGGCGGGGCTG

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GACGGGGT
GGGGGCGGGGC

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GACGGGGT-------
NTNNNGGGGTCANGNNN

MA0516.1_SP2/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GACGGGGT
GGGNGGGGGCGGGGC

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GACGGGGT-------
CTCCAGGGGTCAATTGA