Information for 18-TACATATG (Motif 25)


Reverse Opposite:

p-value:1e-4
log p-value:-1.054e+01
Information Content per bp:1.868
Number of Target Sequences with motif235.0
Percentage of Target Sequences with motif7.42%
Number of Background Sequences with motif2653.0
Percentage of Background Sequences with motif5.68%
Average Position of motif in Targets183.1 +/- 91.5bp
Average Position of motif in Background156.9 +/- 88.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0033.1_FOXL1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TACATATG
TATACATA--

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TACATATG--
AACAKATGGY

MA0025.1_NFIL3/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TACATATG
ANGTTACATAA-

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TACATATG-
ATGMATATDC

MA0124.1_NKX3-1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TACATATG
ATACTTA--

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TACATATG----
NNTATTACATGTANNNT

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TACATATG----
ANTNTTACATGTATNTA

MA0058.2_MAX/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TACATATG---
-CCATGTGCTT

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TACATATG----
ANTATTACATGTANNNN

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TACATATG----
ANTNNTACATGTANNTN