Information for 19-CTCTCTCT (Motif 26)


Reverse Opposite:

p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.908
Number of Target Sequences with motif212.0
Percentage of Target Sequences with motif6.70%
Number of Background Sequences with motif2366.7
Percentage of Background Sequences with motif5.07%
Average Position of motif in Targets163.4 +/- 92.3bp
Average Position of motif in Background158.1 +/- 94.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTCT---
NNAATTCTCGNTNAN

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCT---
ACTTTCACTTTC

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CTCTCTCT---
ACCACTCTCGGTCAC

MA0508.1_PRDM1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCTCT----
TCACTTTCACTTTCN

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTCTCTCT---
AGTATTCTCGGTTGC

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTCT----
ANTCCTTTGTCTNNNN

MA0498.1_Meis1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTCT-----
AGCTGTCACTCACCT

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTCTCTCT
AASCACTCAA-

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTCT--
GSCTGTCACTCA

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCT---
ACTTTCACTTTC