Information for 23-GTTCCAGGCT (Motif 28)


Reverse Opposite:

p-value:1e-3
log p-value:-7.484e+00
Information Content per bp:1.935
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif48.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets169.3 +/- 99.4bp
Average Position of motif in Background145.0 +/- 95.9bp
Strand Bias (log2 ratio + to - strand density)-3.2
Multiplicity (# of sites on avg that occur together)1.82
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0524.1_TFAP2C/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTTCCAGGCT-
CATGGCCCCAGGGCA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTCCAGGCT
CTGTTCCTGG--

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTTCCAGGCT-
---BCAGACWA

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTCCAGGCT
ATGCCAGACN

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GTTCCAGGCT-
------NGCTN

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GTTCCAGGCT--
CTAAGGTTCTAGATCAC

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTTCCAGGCT-
---CCAGACAG

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTCCAGGCT
RCATTCCWGG--

MA0505.1_Nr5a2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTTCCAGGCT---
AAGTTCAAGGTCAGC

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTTCCAGGCT
GCTCCG----