Information for 24-GCGGAYAGTY (Motif 29)


Reverse Opposite:

p-value:1e-3
log p-value:-7.095e+00
Information Content per bp:1.540
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif84.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets172.8 +/- 92.7bp
Average Position of motif in Background161.8 +/- 83.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.93
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCGGAYAGTY
CWGGCGGGAA---

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGGAYAGTY
GGCGGGAAAH-

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGGAYAGTY
GGCGGGAARN-

MA0470.1_E2F4/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCGGAYAGTY
GGGCGGGAAGG-

MA0471.1_E2F6/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCGGAYAGTY
GGGCGGGAAGG-

MA0597.1_THAP1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCGGAYAGTY
TNNGGGCAG--

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCGGAYAGTY
TGGCGGGAAAHB

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCGGAYAGTY
GGTGYTGACAGS-

MA0107.1_RELA/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCGGAYAGTY--
--GGAAATTCCC

MA0024.2_E2F1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCGGAYAGTY
CGGGCGGGAGG--