Information for 5-TTGAACGG (Motif 6)


Reverse Opposite:

p-value:1e-12
log p-value:-2.765e+01
Information Content per bp:1.530
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif48.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets156.1 +/- 86.5bp
Average Position of motif in Background147.3 +/- 93.5bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTGAACGG---
-NHAACBGYYV

PB0045.1_Myb_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGAACGG-------
NNNNTAACGGTTNNNAN

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGAACGG-------
NNANTAACGGTTNNNAN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTGAACGG---
---AACCGANA

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTGAACGG-----
GGAGAAAGGTGCGA

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TTGAACGG-
TATCATTAGAACGCT

PB0197.1_Zfp105_2/Jaspar

Match Rank:7
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------TTGAACGG-
NAAANTTATTGAANCAN

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGAACGG--
CTTGAGTGGCT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTGAACGG--
--YAACBGCC

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTGAACGG-----
ACTATGAATGAATGAT