Information for 14-AAAGGACCCA (Motif 8)


Reverse Opposite:

p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.750
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif378.9
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets147.8 +/- 92.9bp
Average Position of motif in Background160.0 +/- 93.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AAAGGACCCA
GGAGAAAGGTGCGA

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAAGGACCCA--
TCTCAAAGGTCACCTG

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAAGGACCCA--
TCTCAAAGGTCACGAG

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGACCCA
ANGNAAAGGTCA--

MA0143.3_Sox2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAAGGACCCA
AACAAAGG-----

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------AAAGGACCCA
AAACAGACAAAGGAAT--

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------AAAGGACCCA
TATAGATCAAAGGAAAA-

MA0462.1_BATF::JUN/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAGGACCCA
GAAATGACTCA

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAAGGACCCA
RACAAWGG-----

MA0160.1_NR4A2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAAGGACCCA
-AAGGTCAC-