LichtLab Sequencing - run details
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Project
*
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Evans MDS
H2B - E76K
LeleLab collaboration
Melanoma
NSD2 - E1099K
Other
SETD2 inhibitor
UTX - KDM6A
Assay
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RNA-Seq
ChIP-Seq
CUT&RUN
ATAC-Seq
scRNA-Seq
CRISPR
Title
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Organism / cell line
*
ICBR number (if known)
Owner
Notes
Chipmentation experiment.
Samples
Enter sample names, one per row. If possible, use the format COND_SMP, where COND is an experimental condition and SMP is a unique sample name.
P1 32D_Parental_FLAG-Polyclonal P2 32D_Parental_FLAG_Monoclonal P3 32D_Parental_Dnmt3a-Polyclonal P4 32D_Parental_IgG P5 32D_Parental_Input F1 32D_Dnmt3a-FLAG_FLAG-Polyclonal F2 32D_Dnmt3a-FLAG_FLAG-Monoclonal F3 32D_Dnmt3a-FLAG_Dnmt3a-Polyclonal F4 32D_Dnmt3a-FLAG_IgG F5 32D_Dnmt3a-FLAG_Input
Contrasts
Enter contrasts, one per row. A contrast consists of two sample name separated by spaces, as in "Test Control".
F1 P1 F2 P2 F3 P3
Options
ERCC spike-ins
Dmel spike-ins
Ecoli spike-ins
Analyzed
Analysis notes
2023-06-23 16:01:15
Results:
https://lichtlab.cancer.ufl.edu/reports/MDS/NS3104/