LichtLab Sequencing - run details
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Project
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Choose one...
Evans MDS
H2B - E76K
LeleLab collaboration
Melanoma
NSD2 - E1099K
Other
SETD2 inhibitor
UTX - KDM6A
Assay
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RNA-Seq
ChIP-Seq
CUT&RUN
ATAC-Seq
scRNA-Seq
CRISPR
Title
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Organism / cell line
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ICBR number (if known)
Owner
Notes
Lele lab collaboration
Samples
Enter sample names, one per row. If possible, use the format COND_SMP, where COND is an experimental condition and SMP is a unique sample name.
PW176_1 PW176_2 PW176_3 PW177_1 PW177_2 PW177_3 PW178_1 PW178_2 PW178_3 PW179_1 PW179_2 PW179_3 PW180_1 PW180_2 PW180_3
Contrasts
Enter contrasts, one per row. A contrast consists of two sample name separated by spaces, as in "Test Control".
PW176 vs PW177 PW176 vs PW178 PW176 vs PW179 PW176 vs PW180 PW177 vs PW178 PW177 vs PW179 PW177 vs PW180
Options
ERCC spike-ins
Dmel spike-ins
Ecoli spike-ins
Analyzed
Analysis notes