LichtLab Sequencing - run details
Back to list
Project
*
Choose one...
Evans MDS
H2B - E76K
LeleLab collaboration
Melanoma
NSD2 - E1099K
Other
SETD2 inhibitor
UTX - KDM6A
Assay
*
Choose one...
RNA-Seq
ChIP-Seq
CUT&RUN
ATAC-Seq
scRNA-Seq
CRISPR
Title
*
Organism / cell line
*
ICBR number (if known)
Owner
Notes
Ribo-depleted RNA seq
Samples
Enter sample names, one per row. If possible, use the format COND_SMP, where COND is an experimental condition and SMP is a unique sample name.
WT+FBS WT+FBS WT+FBS HET+FBS HET+FBS HET+FBS MUT+FBS MUT+FBS MUT+FBS WT-SerumStarved WT-SerumStarved WT-SerumStarved HET-SersumStarved HET-SersumStarved HET-SersumStarved MUT-SerumStarved MUT-SerumStarved MUT-SerumStarved
Contrasts
Enter contrasts, one per row. A contrast consists of two sample name separated by spaces, as in "Test Control".
WT+FBS HET+FBS WT+FBS MUT+FBS HET+FBS MUT+FBS WT-SerumStarved HET-SerumStarved WT-SerumStarved MUT-SerumStarved HET-SerumStarved MUT-SerumStarved
Options
ERCC spike-ins
Dmel spike-ins
Ecoli spike-ins
Analyzed
Analysis notes