LichtLab Sequencing - run details
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Project
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Evans MDS
H2B - E76K
LeleLab collaboration
Melanoma
NSD2 - E1099K
Other
SETD2 inhibitor
UTX - KDM6A
Assay
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RNA-Seq
ChIP-Seq
CUT&RUN
ATAC-Seq
scRNA-Seq
CRISPR
Title
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Organism / cell line
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ICBR number (if known)
Owner
Notes
Jeko C2 T1150A het D10 E1099K hom
Samples
Enter sample names, one per row. If possible, use the format COND_SMP, where COND is an experimental condition and SMP is a unique sample name.
Jeko_B2_WT-1 Jeko_B7_WT-1 Jeko_C2_T1150A_het-1 Jeko_D10_E1099K_hom-1 Jeko_B2_WT-2 Jeko_B7_WT-2 Jeko_C2_T1150A het-2 Jeko_D10_E1099K hom-2 Jeko_B2_WT-3 Jeko_B7_WT-3 Jeko_C2_T1150A_het-3 Jeko_D10_E1099K_hom-3
Contrasts
Enter contrasts, one per row. A contrast consists of two sample name separated by spaces, as in "Test Control".
Jeko_C2_T1150A_het J eko_B2_WT Jeko_C2_T1150A_het Jeko_B7_WT Jeko_D10_E1099K_hom Jeko_B2_WT Jeko_D10_E1099K_hom Jeko_B7_WT Jeko_B7_WT Jeko_B2_WT
Options
ERCC spike-ins
Dmel spike-ins
Ecoli spike-ins
Analyzed
Analysis notes