LichtLab Sequencing - run details
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Project
*
Choose one...
Evans MDS
H2B - E76K
LeleLab collaboration
Melanoma
NSD2 - E1099K
Other
SETD2 inhibitor
UTX - KDM6A
Assay
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RNA-Seq
ChIP-Seq
CUT&RUN
ATAC-Seq
scRNA-Seq
CRISPR
Title
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Organism / cell line
*
ICBR number (if known)
Owner
Notes
Comparisons involve samples from GE8268
Samples
Enter sample names, one per row. If possible, use the format COND_SMP, where COND is an experimental condition and SMP is a unique sample name.
Scramble5nMDex-1 Scramble5nMDex-2 Scramble5nMDex-3 WDR265nMDex-1 WDR265nMDex-2 WDR265nMDex-3
Contrasts
Enter contrasts, one per row. A contrast consists of two sample name separated by spaces, as in "Test Control".
Scramble5nMDex NTKO_scramble-DMSO WDR265nMDex NTKO_WDR26-DMSO
Options
ERCC spike-ins
Dmel spike-ins
Ecoli spike-ins
Analyzed
Analysis notes