LichtLab Sequencing - run details
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Project
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Evans MDS
H2B - E76K
LeleLab collaboration
Melanoma
NSD2 - E1099K
Other
SETD2 inhibitor
UTX - KDM6A
Assay
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RNA-Seq
ChIP-Seq
CUT&RUN
ATAC-Seq
scRNA-Seq
CRISPR
Title
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Organism / cell line
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ICBR number (if known)
Owner
Notes
this is atac seq for daphne
Samples
Enter sample names, one per row. If possible, use the format COND_SMP, where COND is an experimental condition and SMP is a unique sample name.
Mino3-1 Mino3-2 Mino3-3 Mino5-1 Mino5-2 Mino5-3 Mino16.5-1 Mino16.5-2 Mino16.5-3 Mino16.6-1 Mino16.6-2 Mino16.6-3 Mino4-1 Mino4-2 Mino4-3 Mav1-1 Mav1-2 Mav1-3 Mav6-1 Mav6-2 Mav6-3 Mav7-1 Mav7-2 Mav7-3 Mav10-1 Mav10-2 Mav10-3 Mav18-1 Mav18-2 Mav18-3 Mav22-1 Mav22-2 Mav22-3
Contrasts
Enter contrasts, one per row. A contrast consists of two sample name separated by spaces, as in "Test Control".
Options
ERCC spike-ins
Dmel spike-ins
Ecoli spike-ins
Analyzed
Analysis notes