| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
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| 1 |  | Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.520e+01 | 0.0000 | 1345.0 | 49.20% | 17306.2 | 41.32% | motif file (matrix) |
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| 2 |  | Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-13 | -3.197e+01 | 0.0000 | 1297.0 | 47.44% | 16750.2 | 39.99% | motif file (matrix) |
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| 3 |  | Sp1(Zf)/Promoter/Homer | 1e-12 | -2.881e+01 | 0.0000 | 1226.0 | 44.84% | 15857.8 | 37.86% | motif file (matrix) |
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| 4 |  | YY1(Zf)/Promoter/Homer | 1e-11 | -2.696e+01 | 0.0000 | 243.0 | 8.89% | 2293.4 | 5.48% | motif file (matrix) |
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| 5 |  | GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-9 | -2.282e+01 | 0.0000 | 1319.0 | 48.24% | 17601.4 | 42.02% | motif file (matrix) |
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| 6 |  | ETS(ETS)/Promoter/Homer | 1e-9 | -2.270e+01 | 0.0000 | 834.0 | 30.50% | 10457.3 | 24.97% | motif file (matrix) |
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| 7 |  | ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-9 | -2.242e+01 | 0.0000 | 1168.0 | 42.72% | 15362.5 | 36.68% | motif file (matrix) |
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| 8 |  | Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-9 | -2.159e+01 | 0.0000 | 1612.0 | 58.96% | 22164.1 | 52.92% | motif file (matrix) |
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| 9 |  | ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-8 | -1.922e+01 | 0.0000 | 1628.0 | 59.55% | 22573.9 | 53.90% | motif file (matrix) |
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| 10 |  | ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-5 | -1.341e+01 | 0.0000 | 1320.0 | 48.28% | 18292.2 | 43.67% | motif file (matrix) |
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| 11 |  | GFY-Staf(?,Zf)/Promoter/Homer | 1e-5 | -1.299e+01 | 0.0001 | 258.0 | 9.44% | 2929.9 | 7.00% | motif file (matrix) |
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| 12 |  | NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.189e+01 | 0.0002 | 617.0 | 22.57% | 8000.8 | 19.10% | motif file (matrix) |
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| 13 |  | ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-4 | -1.141e+01 | 0.0002 | 871.0 | 31.86% | 11739.4 | 28.03% | motif file (matrix) |
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| 14 |  | GFY(?)/Promoter/Homer | 1e-4 | -1.128e+01 | 0.0002 | 258.0 | 9.44% | 3005.1 | 7.17% | motif file (matrix) |
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| 15 |  | KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-4 | -1.024e+01 | 0.0006 | 1954.0 | 71.47% | 28409.5 | 67.83% | motif file (matrix) |
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| 16 |  | EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-4 | -1.009e+01 | 0.0007 | 1317.0 | 48.17% | 18549.0 | 44.29% | motif file (matrix) |
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| 17 |  | E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.483e+00 | 0.0012 | 1158.0 | 42.36% | 16199.3 | 38.68% | motif file (matrix) |
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| 18 |  | HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-3 | -9.088e+00 | 0.0017 | 1262.0 | 46.16% | 17813.2 | 42.53% | motif file (matrix) |
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| 19 |  | E-box(bHLH)/Promoter/Homer | 1e-3 | -8.873e+00 | 0.0019 | 218.0 | 7.97% | 2579.6 | 6.16% | motif file (matrix) |
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| 20 |  | NRF(NRF)/Promoter/Homer | 1e-3 | -8.715e+00 | 0.0022 | 597.0 | 21.84% | 7952.4 | 18.99% | motif file (matrix) |
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| 21 |  | CRE(bZIP)/Promoter/Homer | 1e-3 | -8.547e+00 | 0.0024 | 452.0 | 16.53% | 5874.8 | 14.03% | motif file (matrix) |
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| 22 |  | E2F(E2F)/Hela-CellCycle-Expression/Homer | 1e-3 | -8.472e+00 | 0.0025 | 186.0 | 6.80% | 2166.0 | 5.17% | motif file (matrix) |
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| 23 |  | NFY(CCAAT)/Promoter/Homer | 1e-3 | -7.999e+00 | 0.0039 | 1037.0 | 37.93% | 14531.6 | 34.69% | motif file (matrix) |
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| 24 |  | ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-3 | -7.507e+00 | 0.0060 | 1586.0 | 58.01% | 22950.0 | 54.79% | motif file (matrix) |
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| 25 |  | SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.141e+00 | 0.0084 | 1060.0 | 38.77% | 14972.3 | 35.75% | motif file (matrix) |
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| 26 |  | ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.181e+00 | 0.0210 | 164.0 | 6.00% | 1982.7 | 4.73% | motif file (matrix) |
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| 27 |  | Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.696e+00 | 0.0329 | 367.0 | 13.42% | 4881.6 | 11.65% | motif file (matrix) |
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| 28 |  | USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.526e+00 | 0.0375 | 555.0 | 20.30% | 7636.7 | 18.23% | motif file (matrix) |
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| 29 |  | E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer | 1e-2 | -5.402e+00 | 0.0410 | 389.0 | 14.23% | 5225.2 | 12.48% | motif file (matrix) |
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| 30 |  | Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.030e+00 | 0.0576 | 480.0 | 17.56% | 6588.4 | 15.73% | motif file (matrix) |
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| 31 |  | ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-2 | -5.022e+00 | 0.0576 | 444.0 | 16.24% | 6062.9 | 14.48% | motif file (matrix) |
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